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Supper-resolution ORCA-Flash Images

  • Sample: actin bundles in fixed HEK293T cells, labeled with the actin binding peptide Lifeact fused to d2EosFP
  • Imaging conditions: Exposure time: 50 ms; Gain = 8; Binning = 2; In 375 × 458 pixels after binning; Effective pixel size at sample = 145 nm
  • Photos courtesy of Dr. Zhen-li Huang (Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology)
orca flash series

Figure 1. The capability of the Flash 2.8 sCMOS camera in localization microscopy. A stack of 2500 image frames (Exposure time: 50 ms; Gain = 8; Binning = 2; In 375 x 458 pixels after binning; Effective pixel size at sample = 145 nm) was used to construct TIRF images (subset 1 in a, c, e) and localization microscopy images (subset 2 in b, d, f) of actin bundles in fixed HEK293T cells, labeled with the actin binding peptide Lifeact fused to d2EosFP. The data in (f) were cleaned up (g) and further analyzed (h). The projection of all molecules in (g) to an orthogonal direction of the mean contour line is shown in (h). The FWHM of the histogram in (h) was found to be 44 nm by Gaussian fitting. Scale bars: 15 mm for (a, b), 2 mm for (c, d), and 500 nm for (e, f). The total number of localized molecules is 2.3 x 106 in (b).

flash speed sample

Figure 2. Histograms of the height of peak pixel after background subtraction (a), total collected photons (b), signal-noise-ratio (c), signal-background-ratio (d) and localization precision measured in standard deviation (e) from single molecules. The mean values of individual histograms are shown in the right corner of the corresponding figures. Here the same data as those in Figure 1 were used. Note that the ration between the FWHM and standard deviation of the localization precision is 2.35.

flash resolution sample

Figure 3. Dependence of spatial resolution and the number of image frames in localization microscopy. Super-resolution images were reconstructed with a total number of 500, 1000, 1500, 2000 and 2500 image frames, respectively, and were used to calculate the total number of localized molecules (LNmol) from different number of image frames. The super-resolution image constructed from 2500 frames in Figure 1(b) was used to calculate the sample area occupied by actin bundles (S). Labeling density N equals to LNmol/S, was used to calculate Nyquist resolution equation and overall resolution equation. The localization precision measured in FWHM, σLocalization, is set to be 42 nm.

flash field of view sample

Figure4. Original TIRF image frames in the green box were used to build this movie of actin bundles in fixed HEK293T cells, labeled with the actin binding peptide Lifeact fused to d2EosFP.

View the movie avi video

 


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